BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C02SP1|AL428346
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1739 0.0
>3x_Contig1766
Length = 23951
Score = 1739 bits (877), Expect = 0.0
Identities = 877/877 (100%)
Strand = Plus / Minus
Query: 1 gatcaacgactcacacaagcgcattgagtcgaaatcaacccaattcgccactaattctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3679 gatcaacgactcacacaagcgcattgagtcgaaatcaacccaattcgccactaattctgt 3620
Query: 61 ccagaagcccttctccgaagaaatcttccaattataatgcatttacaaatactcacaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619 ccagaagcccttctccgaagaaatcttccaattataatgcatttacaaatactcacaaca 3560
Query: 121 gtaccaataatgatagtcttttatatcaacagtccagaaactgcgtcataaaaagacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 gtaccaataatgatagtcttttatatcaacagtccagaaactgcgtcataaaaagacttg 3500
Query: 181 agagagaaaaacagagaagggaatcagaaagcgaacaagccctgatatctacatctctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3499 agagagaaaaacagagaagggaatcagaaagcgaacaagccctgatatctacatctctgt 3440
Query: 241 aagtcagtaaagtcgccatatgttcaggcatctaaacatatgttcctgcatattcgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3439 aagtcagtaaagtcgccatatgttcaggcatctaaacatatgttcctgcatattcgtttc 3380
Query: 301 aaacaggttaaaaggaaaagtagttacaatactaaaatatagacgttgtttccataatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3379 aaacaggttaaaaggaaaagtagttacaatactaaaatatagacgttgtttccataatca 3320
Query: 361 tttcatacaaatcataaataaaacccaatacacagagacaaagttacaaaagtaggattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3319 tttcatacaaatcataaataaaacccaatacacagagacaaagttacaaaagtaggattc 3260
Query: 421 aattagaatacattgatcaagcataggagggtgggatagtgctgataaatcctaatttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3259 aattagaatacattgatcaagcataggagggtgggatagtgctgataaatcctaatttca 3200
Query: 481 cagttattattataatttcacggaatcgatcaagtgcttaacgataccagggttggataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3199 cagttattattataatttcacggaatcgatcaagtgcttaacgataccagggttggataa 3140
Query: 541 tgtggagacgtcgcccaattgatcagattcaccggctaggatctttctcaaaatacgtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 tgtggagacgtcgcccaattgatcagattcaccggctaggatctttctcaaaatacgtct 3080
Query: 601 cataatcttgccagatctagtctttggtagatcatcaactaggacgatcaacttaggagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 cataatcttgccagatctagtctttggtagatcatcaactaggacgatcaacttaggagc 3020
Query: 661 agcgaatggaccaatatcctttctaacggtgatgatcaaatgctttttgatgtcttgtaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 agcgaatggaccaatatcctttctaacggtgatgatcaaatgctttttgatgtcttgtaa 2960
Query: 721 ctcggactcgcttgcagcagttaaactagacttgttcttcaatactacaaaggcagcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 ctcggactcgcttgcagcagttaaactagacttgttcttcaatactacaaaggcagcaac 2900
Query: 781 ggcttgaccagtcaattcgtcgttaaacccaacaactgcacattcggcaaccatatcatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 ggcttgaccagtcaattcgtcgttaaacccaacaactgcacattcggcaaccatatcatc 2840
Query: 841 ttcaatgatagcagcttcaatttcagcagtagacaac 877
|||||||||||||||||||||||||||||||||||||
Sbjct: 2839 ttcaatgatagcagcttcaatttcagcagtagacaac 2803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6630
Number of Sequences: 1807
Number of extensions: 6630
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)